Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNCSAAIGGLMSCGPYVLPGNQLTPSTQCCSAIQAVNH----------GCLCET----------INIISSLPGHCSLPPVSCGTA
2ALG Chain:A ((3-77))
-TCGQVSSSLAPCIPYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVS-------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35161 for 328 contacts (-107.2/contact) +
2D Compatibility (PS) -5673 + (NN) -4561 + (LL) 264
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -48481.0 ( -147.81 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: