Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCPSQLNSLNVCAPFVVPGATNTNPNAECCSALQSVEH----------DCLCNTL----------RIAARLPSQCNLA-------PVNCGNW
1SIY Chain:A ((2-89))
-TCGQVQGNLAQCIGFLQKG---GVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNS-
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31902 for 393 contacts (-81.2/contact) +
2D Compatibility (PS) -6500 + (NN) -5285 + (LL) 392
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -47295.0 ( -120.34 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: