Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKSTTPDNEAFKLAPCASAAQDENASVSQSCCAQVKKLGQN--------PSCLCAVMLSNTAKMS-GADPQIAVTIPKRCNIATRPVGYKCGPYTLP
1T12 Chain:A ((3-78))
--------TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSA-AGAISGINLGKAAGLPSTCGVNIP------------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13360 for 455 contacts (-29.4/contact) +
2D Compatibility (PS) -6846 + (NN) -1940 + (LL) 512
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -24534.0 ( -53.92 by residue)
QMean score : 0.165
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: