Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGATPPDTVALRLAPCASAAEDPGSAPSGSCCSAVHAIGKQSPRC--------LCAVML---------SNTARSAGI----KAEVAITI------PKRCNLADRPVGYKCGDYTLP
2GOW Chain:A ((2-117))
---SSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPMDWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRNREKTGESNCCVIL
General information:
TITO was launched using:
RESULT:
Template:
2GOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34849 for 516 contacts (-67.5/contact) +
2D Compatibility (PS) -9609 + (NN) -5077 + (LL) 76
1D Compatibility (HY) 800 + (ID) 600
Total energy: -49259.0 ( -95.46 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_2GOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GOW-query.scw
PDB file :
Tito_Scwrl_2GOW.pdb
: