Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGEC--GKTTTPD-----KEAFKLAPCASAAQDENASVSSQCCAKVKRIEQNPACLCAVMLSNTAKSSGIDPEI----------------AMTIPKRCNI--------ADRPVGYKCGAYTLP
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGS--QVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEH---GAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15644 for 473 contacts (-33.1/contact) +
2D Compatibility (PS) -8352 + (NN) -6570 + (LL) 480
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -34436.0 ( -72.80 by residue)
QMean score : 0.309
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: