Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------IGAGGSRSKRDRESCEESRIQTCLDVVNSGLKISTECCKFLKEQQPCLCDVTKTSKIKTNVLSSRLKSCGIHNLKCGNNNNAMRTSNPPNQ----- |
2GD7 Chain:A ((1-107)) | GAMAGDGSEFLQRDFSETYERYHTESLQNMSKQELIKEYLELEKCLSRMEDENNRLRLESKR-----LGGDDARVRELELELDRLRAENLQLLTENELHRQQERAPLSKFGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13280 for 376 contacts (35.3/contact) +
2D Compatibility (PS) -8990 + (NN) -2016 + (LL) 404
1D Compatibility (HY) 0 + (ID) 500
Total energy: 2178.0 ( 5.79 by residue)
QMean score : 0.291
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