Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DMSPSQCKEEQRLLVNACRPVIFGRSPSAACCQRVRVTHVECVCPVVTPKLAALIGVERTIKQIEGCGRTVPHNFKCGSITTP---
1X2I Chain:A ((2-69))
---ALTLAERQRLIVEGLPHV------SATLARRLL-KHFGSVERVFTASVAELM-------KVEGIGEKIAKEIR-RVITAPYIE
General information:
TITO was launched using:
RESULT:
Template:
1X2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39611 for 427 contacts (-92.8/contact) +
2D Compatibility (PS) -6740 + (NN) -1256 + (LL) 992
1D Compatibility (HY) -6800 + (ID) 1050
Total energy: -54465.0 ( -127.55 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_1X2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X2I-query.scw
PDB file :
Tito_Scwrl_1X2I.pdb
: