Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACAATTSLLA-CLPATQSDIM-PSATCCTQLSSYVA--NNGQ----DCLCSASTSN-T--ARSDLALKLPQKCNLKFK----AGTTCNVIPGGQ
1AFH Chain:A ((4-92))
-CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV----
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31450 for 511 contacts (-61.5/contact) +
2D Compatibility (PS) -7439 + (NN) -1546 + (LL) -220
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -44755.0 ( -87.58 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: