Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLSQVRTCTSAVIAPNQMPSQQCCSELSAITD---------FNCFCSMLLNQGTNLNQDYINNALLIPSKCGEQGRNLRGQRCGNYAIP
1BWO Chain:A ((7-76))
---DSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARG--IHNLNEDNARSIPPKCGVN---------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23539 for 388 contacts (-60.7/contact) +
2D Compatibility (PS) -6229 + (NN) -3304 + (LL) 340
1D Compatibility (HY) -800 + (ID) 1050
Total energy: -34582.0 ( -89.13 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: