Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLQQVAGCLDAVTKGAT-PTGSCCTQLGQVDA----------PCFCNLLAN-GKYSDAYVNNALHVPARCGSNSAAYAKFKGRNCAGYVVP
1AFH Chain:A ((8-78))
---ASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC-LKNAAAGVSGLNAGNAASIPSKCGVS------------------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26615 for 409 contacts (-65.1/contact) +
2D Compatibility (PS) -5866 + (NN) -520 + (LL) 1060
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -35041.0 ( -85.67 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: