Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EVSCGDSVRALIPCGSFLVGADAAAAPSESCCRGALALRGMASTTAARRELCKCLMQSGPSFGVLPDRARQLPARCNLGVAIPVGPETDCDKIP
2KXE Chain:A ((1-72))
---MDEFVKGLMK-NGYLITPSAYYLLVGHFNEGKFSLIELIKFAKSRE-----------TFIIDDEIANEFLKSIGAEVELPQEIK-------
General information:
TITO was launched using:
RESULT:
Template:
2KXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36324 for 453 contacts (-80.2/contact) +
2D Compatibility (PS) -7809 + (NN) -1527 + (LL) 1028
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -50382.0 ( -111.22 by residue)
QMean score : 0.127
(partial model without unconserved sides chains):
PDB file :
Tito_2KXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KXE-query.scw
PDB file :
Tito_Scwrl_2KXE.pdb
: