Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------GSDCQNDIQMLE--TTCYKYVAKDAPTSPPS----------QECCDTMNGVDVPCVCSYLGA------PGIKENISMEKVFYVAQQCGVSIPGNCGGSKRA
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM-SQPCQM----
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31316 for 475 contacts (-65.9/contact) +
2D Compatibility (PS) -8451 + (NN) -7256 + (LL) 484
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -50489.0 ( -106.29 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: