Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DDDATLDCDSQVNGLAGNCMTAVLIGTKPSSKCCKFVRSAQL----------DCLCSKITKDVTKMITEHLLNTALKIAKQCNWELP----HNYQCGSYTFP
1BWO Chain:A ((2-89))
------DCGHVDSLV-RPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA---RGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24002 for 471 contacts (-51.0/contact) +
2D Compatibility (PS) -7369 + (NN) -924 + (LL) 592
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -35153.0 ( -74.63 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: