Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SHNVGALASSCEESDFLYKSLPCVKGGTVMSTPSSQCCVAVRAMA----------LECLCRLIVSA---TGASSEQTVKNYVKTCKMKAP----PGFKC
2ALG Chain:A ((11-88))
----------------LAPCIPYVRGG---GAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQLSASVPGVNPNNA-AALPGKCGVSIPYKISASTNC
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19168 for 354 contacts (-54.1/contact) +
2D Compatibility (PS) -6675 + (NN) -4967 + (LL) 1400
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -32960.0 ( -93.11 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: