Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AELSPSQCKQERQLGINSCKAVVFGQPASPACCQRIRVSHWECVCPAFNPKLAALIDINKAIKILQTCGRKVPHHFKCGSLYFP
3QKS Chain:C ((353-379))
----------------------------------------------EFELKIIDILDFDYIIKLITE-----------------
General information:
TITO was launched using:
RESULT:
Template:
3QKS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6600 for 81 contacts (-81.5/contact) +
2D Compatibility (PS) -2093 + (NN) 85 + (LL) 3488
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -8570.0 ( -105.80 by residue)
QMean score : 0.226
(partial model without unconserved sides chains):
PDB file :
Tito_3QKS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QKS-query.scw
PDB file :
Tito_Scwrl_3QKS.pdb
: