Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ISGKEENATCVMA--NLQICKSAVTTGNP-HSKECCEKLKE-----------QQSCFCEYLKDPLVVPY--ITY--AKIILAACGLSFPNC
1AFH Chain:A ((2-80))
-------ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAA-AGVSGLNAGNAASIPSKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45778 for 408 contacts (-112.2/contact) +
2D Compatibility (PS) -6584 + (NN) -3908 + (LL) 560
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -58510.0 ( -143.41 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: