Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------TVENAADCAAVGTLISSCTEFVNYGYPDPIPG-SSCCDAMTVIGTYSDSSE------KRKWLCNCFMDLINVYNSNATAISTLSGFCGVVLGFTIDPNT----DCNFIQ---------------------- |
| 4K0D Chain:A ((5-147)) | IAASADAQLELIGPRAAAAASLESAVLHVSLTARAYALTPEPARMDALQAALRRLEGAAARFAALPKSPEGAALSGRILAAVPPFEKAAVALGTAVATGGDDSAIRAREATLPPMREELLSLLRTFGALQQAHDAGASHTILA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29429 for 621 contacts (-47.4/contact) +
2D Compatibility (PS) -9298 + (NN) 3582 + (LL) 0
1D Compatibility (HY) 2800 + (ID) 500
Total energy: -32845.0 ( -52.89 by residue)
QMean score : 0.297
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