Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLNTHPKKKEIVAEFNNEHYINESDLKTLEEGKDLVDKINNINLIQQNEESEELNIGKVLA
1TU5 Chain:A ((41-66))
-----------QLFADLSREELTTVMSFLTQQLGPDLVD------------------------
General information:
TITO was launched using:
RESULT:
Template:
1TU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3008 for 99 contacts (30.4/contact) +
2D Compatibility (PS) -2638 + (NN) 381 + (LL) 2348
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 1199.0 ( 12.11 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1TU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TU5-query.scw
PDB file :
Tito_Scwrl_1TU5.pdb
: