Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILLELQFYLSLPHIFSYQQMHKNEEISEAKTSRNAEEVKEIVKTQLEGLKQLKKQLKQKLGV
1PWU Chain:A ((30-62))
-----------------------------KTQEEHLKEIMKHIVKIEVKGEEAVKKEAAEKLLE
General information:
TITO was launched using:
RESULT:
Template:
1PWU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10878 for 144 contacts (75.5/contact) +
2D Compatibility (PS) -3419 + (NN) -5 + (LL) 2848
1D Compatibility (HY) -1600 + (ID) 500
Total energy: 8202.0 ( 56.96 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_1PWU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PWU-query.scw
PDB file :
Tito_Scwrl_1PWU.pdb
: