Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWFYKLPSTNILDTQLTDVTTAPVVKLNILIITSNSTVVPVDVELGNLLCLQVMQARNISDGIMWGYTGAVILHVI
1YIQ Chain:A ((481-525))
--------------------TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM
General information:
TITO was launched using:
RESULT:
Template:
1YIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20934 for 240 contacts (-87.2/contact) +
2D Compatibility (PS) -4926 + (NN) 265 + (LL) 1504
1D Compatibility (HY) 800 + (ID) 250
Total energy: -23541.0 ( -98.09 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_1YIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YIQ-query.scw
PDB file :
Tito_Scwrl_1YIQ.pdb
: