Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKIGFLAVFALVISSQIGSGIFMLPISLAPYSTYSLISWAISGFGAVSLALVFATLCAKFPETGGPHVYVKHAFGP---TAAFFVGWTYWVISWVSTTALIVVG-VGYLTPFLHEEIKNIHLFL-ELLLFTIITLINLRGVATAGRVEFLLTVIKIAVLLAIPVMALFFFN-----RNNFIISKEMSSLTISQILARSTLLTLWCFVGVELATAPAGSVNNPAKTIPRAVVLGTICVAIIYF------INNFAIMGLING--NDLANSRAPYVDAIKIMFSGNW-HLIISIVAFVFCVGSLNAWVLSSGQVAFGLAKDRLMPQLFAKRNEHGSPFWGITTSSSGTAILLILTSNNNFAQQITSIIDFSVVSFLFVYLACSLAFLKVVIKERNYHKLLTGSIATTFCCWVILETSINTLLIASLFTTSGIPLYLFWYRRASAQ |
| 3GI9 Chain:C ((44-315)) | ---------------------------------------TFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSI--LLW-MSYVISIALFAKGFAGYFLPLI-APINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLIL------GLFIFAGLITIHPSYVI-PDLAPSAVSGMIFASAIFFL-SYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFL--------GNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176131 for 1771 contacts (-99.5/contact) +
2D Compatibility (PS) -25693 + (NN) -7845 + (LL) 5064
1D Compatibility (HY) -31600 + (ID) 3800
Total energy: -240005.0 ( -135.52 by residue)
QMean score : 0.201
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