Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYTQLFISVIALVISLFAGYKVVKHQPQSVLNIKVAIIDSDKVINESLALHNIQQQIKEQNSKLQQEFENELDKLKPSKEELELLSEEAKKERAEQFNKLALNARDNYTKKMSY---LEESYRDAVDSVFNKIKEVAKKTAEKNNIDLVLFISKKNQVLYSMNEIDLSDVVLKNINKEIPEFTLKGVN |
1HNH Chain:A ((216-291)) | ----------------------------------KVAVTELAHIVDETLAANNLDR--------------SQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41600 for 429 contacts (97.0/contact) +
2D Compatibility (PS) -7691 + (NN) -1677 + (LL) 8032
1D Compatibility (HY) 2800 + (ID) 100
Total energy: 42964.0 ( 100.15 by residue)
QMean score : 0.159
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