Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGDAVKVIAEELKGYIERIEKLEQEKKNVQDQIHDVYAKAADKGWNIKVMKQIIRLRKMEDGDRAEQEILLNTYKRALGMSCEEN
4MB2 Chain:A ((109-176))
--DRVKAIAEELRKYDPEIELLGINPTKRIPGLEHERGKVDENG----IWKADVVVVPLEDGDRTEALVRMGKFVITIDLNPLSR
General information:
TITO was launched using:
RESULT:
Template:
4MB2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 22579 for 373 contacts (60.5/contact) +
2D Compatibility (PS) -6922 + (NN) -698 + (LL) 380
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: 11089.0 ( 29.73 by residue)
QMean score : 0.011
(partial model without unconserved sides chains):
PDB file :
Tito_4MB2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MB2-query.scw
PDB file :
Tito_Scwrl_4MB2.pdb
: