Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLKAWLITTFLLLYPSATFCDDCNFNLPYRGLSCNLDLSHKNLSNIKKLLNNSDKFVALTFDDGPSSNRVNNIINILENYKAKATFFLLGERINKKTSEIVKKIYNAGHELGNHSWSHKKLTSLSSEKQLQELEKTNMVIKNAIERDVKWFRSPYGCHDDNLIKNTNQLNMCSILWTVDSLDWQGDKPEILVDRVVGNVHNGAIILFHDHDNKSNTVEALPQIIKILKKLGYEFVTLSEWEERVCKAKGVSMGEGVFKKILCG |
4M1B Chain:A ((53-241)) | ---------------------------------------------------DTSKKQVAFTFDISWGDKKAIPILDTLKERDIKNATFFLSAAWAERHPDVVERIIKDGHEIGSMGYNYTSYTSLETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGDFNKATLKIAESLGYTVVHWSNNSNDWKNPGVNKIVSTVSNNLKGGDIVLLHASDSALQTNKALPLLLQKLKSDGYEQISVSQLISNT------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56783 for 1563 contacts (-36.3/contact) +
2D Compatibility (PS) -20317 + (NN) -12097 + (LL) 4444
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -96903.0 ( -62.00 by residue)
QMean score : 0.469
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