Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSPAIFSIGPVSIHWYSLAYVLGIVFAYWHLHKLDEQKIFTKNFYDSLLTATIIGIILGGRLGF--VLIYDPISYINNPIEILKTWKGGMSFHGGAIGVLCAVIISCRRYNIPIFYTLDLISCGVPIGLFLGRIGNFVNGELFGRVTTMPWGMVFPESGDNLLRHPSQLYEAFFEGLLFFAIANSLFFLTRIRLYHGTLTGIAVIWYGTVRFVVEFFREPDYQVGYLWLDLTMGQLLSIFMTLLGIIVYLSALNSKFNTKSVA |
3U9I Chain:A ((328-375)) | ---------------------------------------------MVESLLAMTVSACFAAGQGGFRFVDLDTPLFLAENP------FDGGMTYHGGTIDLTLIEAGHGVTPR-------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3U9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21977 for 242 contacts (-90.8/contact) +
2D Compatibility (PS) -4620 + (NN) -378 + (LL) 16496
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -15379.0 ( -63.55 by residue)
QMean score : 0.104
|
|
|