Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNNIIESFGRDQLENFINYKNKIGIGALDIALNSGNKKAIEVLKSYGADIENRVD--GESRLLRALKEGNIEKMELLLS
2BKK Chain:B ((73-133))
------------------VNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADV-NAMDYQGYTPLHLAAEDGHLEIVEVLLK
General information:
TITO was launched using:
RESULT:
Template:
2BKK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3067 for 437 contacts (-7.0/contact) +
2D Compatibility (PS) -6586 + (NN) -3187 + (LL) 1016
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -17374.0 ( -39.76 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_2BKK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BKK-query.scw
PDB file :
Tito_Scwrl_2BKK.pdb
: