Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKSIFTFSFFTAVSRISGLIRDILIAMVVGATSLADVFFSSFRFASLFRAFFAERAFATSFVPLYSAESRDSKRAFNFASSVISITFIIVLNFCLIMQTFFSYMVQIFTPGFDQSKLALAVTLSRIMMPYIIFASIASLIGGMLQVKQHFASTAIAPIILNLCLIASLLVPYIKTPAHNLSIAVLIGGMLQLLLMLFGAYKLKAFFFFSMKLSNEVKLFFKRVIPAIINSCVIQISLWIDTIMASFIPNAVSYIYYADRLNQLPQGVVGTAIGTVLLPLISKQANDTENT-VKIQNRALNIGLMLIMPTTAAFIIIPNTILLTLFSYGKFDHYAVQQTAPTLIALSLSLPAFIINKVLLPTFFAKSNLKIPTIFSLACLGINVVLNLLLMNKYQHTGIAIATSISTWINSILLINYLTINKMYKANQVLLLNIAKILVATAVMSVALYVSSSLSAGLFFDRIFARVIYLAALVVLSAVIYFGTLYLMFMGDFKCTKL |
1DX7 Chain:A ((17-44)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QELHSVYMSGLWLFSAVAIVAHLAVYIWRPWF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DX7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4411 for 108 contacts (-40.8/contact) +
2D Compatibility (PS) -2451 + (NN) 2314 + (LL) 43856
1D Compatibility (HY) -2000 + (ID) 150
Total energy: 37158.0 ( 344.06 by residue)
QMean score : -0.158
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