Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQGIVLDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEAIRPLKDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLPVTEPEGS---MVVDIGGGTTEVAIISLGGIVY-----SRSARVGGDIMDEAIRSYIRENHKLLIG-------------ETTAEKIKKSLGSA--------SLPDENNKEWMMVKGR--DLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTKLPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD |
| 3GL1 Chain:A ((148-358)) | -----------------------------------------------------------------------------------------------------------------------VITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAGKSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLRTAAERAKRTLSSVTQTTVEVDSLFDGEDFESSLTRARFEDLNAALFK-----------STLEPVEQVLKDAK---------ISKSQIDE-VVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78812 for 1224 contacts (-64.4/contact) +
2D Compatibility (PS) -19049 + (NN) -5047 + (LL) 10392
1D Compatibility (HY) -7600 + (ID) 3100
Total energy: -103216.0 ( -84.33 by residue)
QMean score : 0.524
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