Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNGTVNKVILVGNLGRNPEIRTMQNGKEMANFSIATSEGWTDKFSGVRSEKTEWHNIVIFSEGLVKVVKDFVRKGSKVYIEGSLKTRKWTDQNGSERYTTEVVLQNFNGTLTLLDSRNNAASSDYKSNEYKQDETGQKDQYENFDSEVKEELIDDEIPF
1SRU Chain:A ((1001-1112))
-ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESW---------EQTEWHRVVLFGK-LAEVASEYLRKGSQVYIEGQLRTRKWTD---QDRYTTEVVV-NVGGTMQML---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50048 for 634 contacts (-78.9/contact) +
2D Compatibility (PS) -10903 + (NN) -3177 + (LL) 2056
1D Compatibility (HY) -12800 + (ID) 3000
Total energy: -77872.0 ( -122.83 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_1SRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SRU-query.scw
PDB file :
Tito_Scwrl_1SRU.pdb
: