Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTLVNILFIMIPLLFSVAYLVYFERKVIGAIQLRHGPSVVGPFGLLQPFADAIKLLVKEPIIPFRANTILFIMAPMLTFILALIVWAVIPFGAEVITENGQQIVIPKVIANVNIGVLYVLAISSLGIYGIIVAGWSSNSNYAFLGSIRSAAQMISYEVSMGLIVATVVITTGTLNLGEMVATKHSMPFWIDLLMMPIGVVFFISLLAETNRHPFDLPEAEAELVSGYNVEYSSMPFALFFLGEYANMILGSAMMTIFFLGGWYPPLKLSLLYKIPGLIWFVLKIVLLLFIFVWTRATIPRYRYDQLMRLGWKVFLPISVLWVILISGVLLFTGNLPGRGL |
| 1Q90 Chain:G ((17-30)) | ---------------------TIAGLFVTAYLQYL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 726 for 48 contacts (15.1/contact) +
2D Compatibility (PS) -1367 + (NN) 418 + (LL) 28488
1D Compatibility (HY) -400 + (ID) 100
Total energy: 27765.0 ( 578.44 by residue)
QMean score : 0.043
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