Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIHVAIYMLLLCMSAMLYRIAKLSDIYNKALAFNHFSTQVILLITAVSIILDSFFLVDIALLYASVSFISTIALMRLMLL
2DAE Chain:A ((20-30))
---------------------KFPEVPEVVVSRCMLQNNNNLDACCAVLSQESTRYLYGEGDLNFSDDSGISGPSSG---
General information:
TITO was launched using:
RESULT:
Template:
2DAE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3994 for 33 contacts (-121.0/contact) +
2D Compatibility (PS) -1045 + (NN) 340 + (LL) 3224
1D Compatibility (HY) -800 + (ID) 50
Total energy: -2325.0 ( -70.45 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_2DAE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DAE-query.scw
PDB file :
Tito_Scwrl_2DAE.pdb
: