Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGSIFIFLGICLVTISTIGVIRFTDFYTRLHAAGITDSSGAMLLLIGLALQNEFSVNTVKIVLLIFIIWVANSTNSYILARTHYKSKEKAIKES
3S9G Chain:A ((267-277))
-----------------------FSETYERYHTE-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3S9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2171 for 35 contacts (-62.0/contact) +
2D Compatibility (PS) -1060 + (NN) 215 + (LL) 7660
1D Compatibility (HY) -800 + (ID) 200
Total energy: 3644.0 ( 104.11 by residue)
QMean score : -0.126
(partial model without unconserved sides chains):
PDB file :
Tito_3S9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S9G-query.scw
PDB file :
Tito_Scwrl_3S9G.pdb
: