Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEIDYHKITIVMTNGQEFETRSTYGKEGDKIKLDRDPLTHPAWTGSLTSGSTNKTSKIAKFNDKYGNIF
1VF5 Chain:C ((172-193))-----------------------------------------------FTASATGTITKIAKEEDEYGNVK


General information:
TITO was launched using:
RESULT:

Template: 1VF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1161 for 54 contacts (21.5/contact) +
2D Compatibility (PS) -2297 + (NN) -6 + (LL) 2520
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -322.0 ( -5.96 by residue)
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_1VF5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VF5-query.scw
PDB file : Tito_Scwrl_1VF5.pdb: