Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYDYERGIENNVALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPHPSTILFNRNNFRLINQEQKKELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRY--NTKHIIVGESCTFGHKRLGNTLILRKHSETYGYSLTKLEPLTVNGKICSSSSIREHIQKGEIEIANKLLGRSYQVSGTVMKGALRGREIGFPTINIPI-EDCMIKPKFGTYYAKVAFTSLDVIPARDAGIYRSQYQSNETTEGSAKGSFSGSGPSWLYGVVNIGMRPTFNDLKKPIVEMHIFDFNEDIYDRKVNIQLLKFIRSEKRFLSVDELTKQINHDILEAYQLRTDL |
| 1T6Y Chain:A ((2-284)) | ---------------VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGL-LMTVESRVEMLSRYA--RTVVLDF------FRIKDLTPEGFVERYLSGVSAVVVGRDFRFGKNASGNASFLRKK----GVEVYEIEDVVVQGKRVSSSLIRNLVQEGRVEEIPAYLGRYFEIEGIVHK---------FPTANIDRGNEKLVDLKRGVYLVRVHL-----------------------PDGKKK-----------FGVMNVGFR------RNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKK----EELKAAIDQDVKSARNMIDDI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -167471 for 2009 contacts (-83.4/contact) +
2D Compatibility (PS) -28052 + (NN) -5171 + (LL) 3456
1D Compatibility (HY) -24800 + (ID) 4400
Total energy: -226438.0 ( -112.71 by residue)
QMean score : 0.477
|
|
|