Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGINNFMNEVLFFKIFYVPFIILLVAFGYIFLTLRFKFLNIRMFKHAFTILCGKYDTDHHDGHITHFQAFVIALSSTVGLGTVAGVAIAVSMGGPGAIPWMMITGFFGMS-AKFAEVTLAFRHRTEGQEQLFSGPFQYIRNGLEEFGFKKLGIILAAVYAVFFVLSGLGGSVAFQTNQMVSILSGYSNWVDSHPW-FLSSIISALLALVIIGGIRRIARVSSALVPVMSLIYIFSCITIITFNIHNFSNVFKILFSNMIDFNAVGGGVVGAFVAGIQRAIFASEAGVGSASITHAVAKDEEPVRTGLVAMIEPCFDTMLICCLTGITIVITGAYQTGIGEGILVTQKAFETVSSWFPIFLIIAAPLFAFSSVISFVYCCEMGWLYLFGAKSIVIYRIAVVVVAFFSGLSKDIMAIANIGGTLFSCLALINMTALILFSSQINDEVQCYSKRLRNNKIN |
| 3DH4 Chain:A ((51-175)) | ------------------------------------------------------------KAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIA-SYEWMSAITLIIVGK---YFLPIFIEK----GIYTIPEFVEKRFNKK----LKTILAVFWISLYI----FVNLTSVLYLGGLALETILGI---PLMYSILGLALFALVYSI------VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANADKAYPWLTQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAPMLGGIGQAFQY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -33740 for 573 contacts (-58.9/contact) +
2D Compatibility (PS) -11273 + (NN) 4773 + (LL) 6968
1D Compatibility (HY) 0 + (ID) 150
Total energy: -33422.0 ( -58.33 by residue)
QMean score : -0.285
|
|
|