Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIPKVSLCINGSTNLTQYITEVRKFPMLSQEEEVRLAKSWNQCKDISSAHKLITSHLNLVVKIAMKFKNYGLLLMDLIMEGNMGLIHAVKKFNPDLGFRFSTYAVWWIEASIKDFILKSWSFVKIGTTQAQRRLFFSLRKIKKRILQYTNRETLNNEEIKAISNELSVSEGDVIQMNYRLACKDQSLNNCIKVGGDSKKELQDMIPCNSVNQEVTYQNREEKELKETILNNALASLNERSRDIFISRY-LSENTQ-TLDELSKKYCVSRERIRQLAEQAMSKVKQHIQSESLKFSLHA |
4JKR Chain:F ((381-623)) | ---------------------------------------SIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIE--TINKLNRISRQMLQEMGREPTPEE----LAERMLMPE-DKIRKVLKIAKEPISMETPI--GDDEDSHLGDFIEDTTL--ELPLDSATTESLR-AATHDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -84450 for 1382 contacts (-61.1/contact) +
2D Compatibility (PS) -25987 + (NN) -12470 + (LL) 4360
1D Compatibility (HY) -15200 + (ID) 3900
Total energy: -137647.0 ( -99.60 by residue)
QMean score : 0.587
|
|
|