Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGSPVILAPMSGVTDYPFRSIVKKLG-ASLLVSEMIASRAMIMQTR---------QSMQKAKVDELTAVQLAGCEPDIMAEAAKLNEDMGAKIIDINFGCPVKKVVNGYAGSALMRNEKKAAEIIEAVVKAV--NVPVTVKIRTGWNNENRNAPRLAKIAEDLGAKMITVHGRTRAQLYNGQA-DWKFIRNVKEQVKIPVIVNGDIKSLNDIQNALKESRADGVMIGRGAYGRPWLINQAINFLSGSEVSEPTASEKLSIILEHYDNILEYYGNDAGIKIAR--KHIGWYSSGFKNSSEFRVRVNNMTDSMEVKENIVSFFSQV |
| 4BF9 Chain:A ((26-330)) | -----VLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKF-EIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-------NLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104727 for 2480 contacts (-42.2/contact) +
2D Compatibility (PS) -31488 + (NN) -12052 + (LL) 856
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -168061.0 ( -67.77 by residue)
QMean score : 0.398
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