Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLSKYKNQSVAVFGLGKTGLSVINVLIKSGAKAYAWDDSKEQMANAKTMYKECNFIHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKAKNQKIVGVTGTNGKSTTTSLIGHILKSAGKKVAIGGNL----GVP--ILDLEKDAEIYVIEISSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHGSMENYIAVKSKLIGGSKVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAEIQEISLKLENHNLSASDAKINLTSNAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGKIENVLFVNDSKATNAESSKKAILSYKNIYWIVGGRSKEGGIESLSKHFARIRKALLIGESTEVFASTMENKVDYVRCCNLEDAFRLAFEEAIKSKEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
| 3ZL8 Chain:A ((84-202)) | -----------------------------------------------------------------------------------------------------------------VVGVTGSSGKTTTKEILYNLLKNKRSVFKTPGNMNTEYGLPLSILNDYKGEEILVLEMAA------SRPGDIA---------------------------------HLCKIAPPDVAVLLNVGSAHLEFFGTRERIMETKMEIIKHSK------ENAIAVTLFDDPDLRKEVPRYRNTLFFGKEGGDSVLKDWWYYEGSTIAEFEAFDSLFTVKLSGYWNGGQLLNIAASLCVMRTLGETVDIFDLASLKTVPGRFNVREKKGVLIVDDTYNASPEAFQTSIEALLRFPGKKFAVVGAMKELGERSKEFHEELGERLNVLDGVYVFLSEPEAEWIKSKKIILKSDDPEKIAKDLATRVKKGDVVLFKASRAVRIERVLEMFEKELEKRA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52316 for 845 contacts (-61.9/contact) +
2D Compatibility (PS) -11578 + (NN) 836 + (LL) 12776
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -61832.0 ( -73.17 by residue)
QMean score : 0.365
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