Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQLLTKFFNLSSSKVELGIEVDHATVPWKGWLNGGQINLLLDMVDHQLGVLLGLEVGSY
3R9J Chain:C ((35-55))
ILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLP-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3R9J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6158 for 71 contacts (-86.7/contact) +
2D Compatibility (PS) -1917 + (NN) 1729 + (LL) 1268
1D Compatibility (HY) -4000 + (ID) 150
Total energy: -9228.0 ( -129.97 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_3R9J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R9J-query.scw
PDB file :
Tito_Scwrl_3R9J.pdb
: