Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKFVRLLSSILVALSVIFLGYCYFTKKGIFAPAVIHNAEVKIGGDFSLINQDGQVIRSNDFKDKYMMIFFGFSSCKKICPMNLGIISETLAKLDEKTSDKLQTFFITVDPECDSTEKLKEFQQQFDYRIQMLTGERKKIDEVIANYKVYTSKVGGEEGINHSSIIYLIGPGGKYVTHFAADLNSDESQS-DKIAAEIKKYINEL
2B7K Chain:A ((20-182))
------------------------------------------LGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRV---------LVDHSIFFYLMDPEGQFVD--ALGRNYDEKTGVDKIVEHVKSYVPA-
General information:
TITO was launched using:
RESULT:
Template:
2B7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76718 for 1148 contacts (-66.8/contact) +
2D Compatibility (PS) -16111 + (NN) -8837 + (LL) 4652
1D Compatibility (HY) -13600 + (ID) 2700
Total energy: -113314.0 ( -98.71 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_2B7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B7K-query.scw
PDB file :
Tito_Scwrl_2B7K.pdb
: