Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNYRFGTKVLIIGSGAAGYAAAIYAARANLEPVVVTGMQP-----GGQLTITMGVENYPGFVS-IQGPELMKQMRLHVEKVGAEIVNDEIKSVEQLEYSNEYKFRSSGNND--DYYSNAVIIAAGSQAKWLGLESERKFQGYGVSACATCDGA--FFRNKIVAVIGGGNTAVEEAIFLTRFAKEVILIHRRDKLRAEKIMQDRLFANNKIKVIWNHTVEQVLGEENPKKVTGITIKSTKIDEIQELRVNGVFIAIGHAPNTGVFKSFIEMDEQGYIITKPGTTLTSRAGVFAAGDVQDKVYRQAVVAAGTGCMAALDAEKFLECTSK |
| 3D8X Chain:A ((12-322)) | --------KVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEIITETVSKVDL--SSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTSLE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223743 for 2637 contacts (-84.8/contact) +
2D Compatibility (PS) -32647 + (NN) -10709 + (LL) 560
1D Compatibility (HY) -22000 + (ID) 7300
Total energy: -295839.0 ( -112.19 by residue)
QMean score : 0.529
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