Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNSNTAEKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLG--------IDTPKGYIISRGDILKNNIKIDYPYVLKPINEGSSIGVH-ITFSHEDYLKLKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDEAAGTMEIRPKNKFYDYKAKYTNGFAEHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
| 3V4Z Chain:A ((5-305)) | ---------------AEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGIDAYGVDTKDFPVTQLKEQGFDKVFIALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKLVWQALGLPISPYVALNRQQFETLSPEELVACVAKLGLPLIVKPSHEGSSVGMSKVDHASELQKALVEAFQ----HDSDV-------------LIEKWLSGPEFTVAILGDEVLPSIRIQPPG------------KTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVDVMQD-RDGHFYLLEVNTSPGMTSHSLVPMAAR-QYGLSFSQLVARILMLAD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145218 for 2313 contacts (-62.8/contact) +
2D Compatibility (PS) -30473 + (NN) -15241 + (LL) 5312
1D Compatibility (HY) -17200 + (ID) 4900
Total energy: -207720.0 ( -89.81 by residue)
QMean score : 0.373
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