Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGAVQIKKTGGPEVLEFIDKSIGEPKGEEVLIRHTAIGLNRYDLEHRKGVRKIKGLPSVLGVEAVGVIEKLGKKIDDSLQIGDRVGYCTAPPGAYCEKRVIHQKYLVKIPDEIPDE---VVAAVLFKGMTAHYLINQSYKIKPGAFVLVHGANGGLGQIICQWAKDKKGVVIGSVSSDKKMEVALQNGCTYAINYNDKNFVSKIMEITQNRGVGAVYDPIGYSTSRLSFESLSKFGIYVSYGQISG-IAPVSFSLLSSRSLFATGTSIYHYKRDRFALVLTAMEIFEMVKKKLLTVRINKKYKFDEIIKAHHDMENRKVSGLNIIKVF |
| 3QWA Chain:A ((12-332)) | ----ILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK-PYVLGREASGTVVAKGKGVTN-FEVGDQVAYISNSTFAQYSK-ISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210072 for 2678 contacts (-78.4/contact) +
2D Compatibility (PS) -34141 + (NN) -12150 + (LL) 620
1D Compatibility (HY) -21200 + (ID) 4950
Total energy: -281893.0 ( -105.26 by residue)
QMean score : 0.493
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