Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDNIIIITGITASGKSELCDNLIKKYGNISIVNCDSKQVYKEIPIITAQPPKQEEF---YRLYGCVPAKENYSVGLWLEDLKGEVDHALENARMPIITGGSGLYISSLINSLSPIPKVSEEIRKNVSELRKNLSKEEFYKLVLSKDSKIQGKISTNDLHRLSRALEVITATGKSIF-VWQESRQLPLFDNFKIYTILPKREDVYRKINSRFVTMIESGAVDEVKKLLN-MNLAPHLPAMRAHGVPEIIKY------LKGKITLSEAIQIAQTNTRHYAKRQYTWFKNQFPNSEVIDCANKLIEFEIF |
| 3EPJ Chain:A ((4-289)) | ----VIVIAGTTGVGKSQLSIQLAQKF-NGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPSETFNEQKITLKFDTLFLW-LYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQCENGVWQVIGFKEFLPWLT--VKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATDLSQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -125504 for 1917 contacts (-65.5/contact) +
2D Compatibility (PS) -28753 + (NN) -16877 + (LL) -76
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -192760.0 ( -100.55 by residue)
QMean score : 0.499
|
|
|