Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLSVIGIKEPVSNKQLYEHCDIRII-FTKRDVIPVPRHWDPEDSITN-------GHTKQLYNKNWIPVSRTGMTG---------KGFEMTESNTGKLVHDRKLLFISSDIKSFFFAIRIE
2RHR Chain:B ((78-157))
---------------------CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH
General information:
TITO was launched using:
RESULT:
Template:
2RHR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2848 for 306 contacts (9.3/contact) +
2D Compatibility (PS) -6023 + (NN) 3379 + (LL) 1600
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -3296.0 ( -10.77 by residue)
QMean score : 0.073
(partial model without unconserved sides chains):
PDB file :
Tito_2RHR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RHR-query.scw
PDB file :
Tito_Scwrl_2RHR.pdb
: