Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFEQIKKDITENDVVLYMKGTSDFPQCGFSGLVVSILKKLNVKFKYINVLENDEIRQSIKKFSNWPTIPQLYIKGEFIGGCDITREIYEKGELQSLLKEKKIVE
2YAN Chain:A ((8-103))
----ERLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSNWPTYPQLYVKGELVGGLDIVKELKENGELLPILRGE----
General information:
TITO was launched using:
RESULT:
Template:
2YAN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72914 for 706 contacts (-103.3/contact) +
2D Compatibility (PS) -10523 + (NN) -3893 + (LL) 668
1D Compatibility (HY) -10800 + (ID) 2100
Total energy: -99562.0 ( -141.02 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_2YAN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YAN-query.scw
PDB file :
Tito_Scwrl_2YAN.pdb
: