Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METDIVVIGAGPVGIFTAFQAGMLDMRCHIIDVLDQAGGQCTALYPEKPIYDIPGYP-VITAQKLIEQLMEQASPFEPVYHLSQRVEEIANNDSQSFIVVTSAGTKVKCKAIIIAAGNGIFEPNRPPLSGILEYENKSVFYNVNKISD---FQDKIIVIAGGGDSAADWTVELSKVAKKIYVIHRRKEFRCVSETRNKLKLLESSGRIELVVPYQLHKLTGNDGQLSAVIIKNITSKEEKKISADFLLPFFGLSMDLGPIGSWDIQL-----ERSRVVVDQATLRTSRDRIYAIGDVAAYLGKLKLILNGFAESTMACYDIYKVIHNSPVNFQYSTSKVVRGKKSDLL |
| 3ISH Chain:A ((3-282)) | ---DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITG---SSEIENYPGVKEVVSGLDFMQPWQEQCFRF-GLKHEMTAVQRVSKKDSH-FVILAEDGKTFEAKSVIIATGG---SPKRTGIKGESEYWGKGV--STCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPIT---LEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEHH---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ISH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199083 for 2141 contacts (-93.0/contact) +
2D Compatibility (PS) -29341 + (NN) -11566 + (LL) 3056
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -256384.0 ( -119.75 by residue)
QMean score : 0.533
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