Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKIATWNVNSIRKRVDQ-LCSFIVDDQIDIILLQEIKCTEEQFP------------YVEIEKLGYECIVYGEVARNGVCVLSKH-PILEKFKIDIVEGYQEARYIECLIKHNNQKMRVVSIYVPNGQSLGSHVFEYKLKFLDNLYERMDNLLKNEELIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREKL-KAILNLGFKDAFRMSHPNLQQFSWWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYIDDRLRKLENPSDHTPIVSIMEW |
4B5M Chain:A ((1-251)) | MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGY----------SGVAVYSKRKPDNVQIGMGIEEFDREGRFVRC----DFGRLSVISLYLPSGSSAEERQ-QVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKA----VSAHVYKDEKFSDHAPLVVEYDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103081 for 1926 contacts (-53.5/contact) +
2D Compatibility (PS) -24811 + (NN) -9124 + (LL) 1816
1D Compatibility (HY) -15200 + (ID) 3850
Total energy: -154250.0 ( -80.09 by residue)
QMean score : 0.441
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