Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSNLYRGLLKTSSRFSDGVKSIFSAKKKLDQSLLDELEELLISMDIGHKTSKLIIDRLASIKFDKEVEHNIITQQLMS--EIEAILNPVVQPLILDKN----------PHIIMVCGVNGNGKTTTIGKLAYKYKNMGKSVMLVACDTFRAAASEQLNIWAERSDCFIVTGEYGN-DSASVAYRAVSQAIKGSVDVVLIDTAGRLQNNVNLMEELSKIYRTIKKLDGTAPHDVILVLDATTGQNAYSQLEAFSKMVSVTGLIITKLDGTAKGGVVIGLAETYRVKLHAIGIGESIEDLREFTSKEFAKALFGCD
2OG2 Chain:A ((89-358))
---------------------------------VLDELEEALLVSDFGPKITVRIVERL---------REDIMSGKLKSGSEIKDALKESVLEMLAK--KTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVNAIFS--
General information:
TITO was launched using:
RESULT:
Template:
2OG2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -226040 for 2143 contacts (-105.5/contact) +
2D Compatibility (PS) -28065 + (NN) -13699 + (LL) 2528
1D Compatibility (HY) -25200 + (ID) 5800
Total energy: -296276.0 ( -138.25 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2OG2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OG2-query.scw
PDB file :
Tito_Scwrl_2OG2.pdb
: