Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPISLPKVRGIYRYSVLMSKITWLNVGGQADILFKPRDIEDLIYLIKNTKLPISVIGATSNMIV-RDSGIRGITVKLGKEFAYIKYKSNNSIIAGGAA--LLSNLAYFAGEQQVSGLEFLVGIPGTIGGGIEMNAGAYGSDVASVVQSIKAVNLSDGNLYEFSSKEMGYVYRGHSLKGQ------------------------WIFIEAEFKGVSSGHEVILHRLKEIINKKNKSQPVRGKTAGCIFKNP--------RAYQAWK------------------LIDGSGCRGLNNGGAKISKKHCNFLLNYNNATASDLENLGNKVRNTVKDKFNIELEWEIRVLGSH |
| 4JB1 Chain:A ((35-336)) | -------------------------------------DVREALALARERGLPLLVIGGGSNLLLTRD--VEALVLRMASQGRRIVSDAADSVLVEAEAGEAWDPFVQWSLERGLAGLENLSLIPGTVGAAPMQNIGAYGVELKDVFDSLTALDRQDGTLREFDRQACRFGYRDSLFKQEPDRWLILRVRLRLTRRERLHLDYGPVRQRLEEEGIASPTARDVSRVICAIRREKLPDPAVLGNAGSFFKNPLVDATQAERLRQAFPDLVGYPQADGRLKLAAGWLIDKGGWKGFRDGPVGVHAQQALVLVNHGGATGAQVRALAERIQEDVRRRFGVELEPEPNLY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91407 for 1737 contacts (-52.6/contact) +
2D Compatibility (PS) -26397 + (NN) -8196 + (LL) 2912
1D Compatibility (HY) -12800 + (ID) 3600
Total energy: -139488.0 ( -80.30 by residue)
QMean score : 0.418
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